Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | A5893_08850 | Not Available | Positive | 2127613 - 2128758 | 41428.6 |
| rnd transporter | A5893_08855 | Not Available | Positive | 2128819 - 2131992 | 115208.0 |
| homoserine dehydrogenase | A5893_08860 | Not Available | Negative | 2132112 - 2133305 | 44390.8 |
| hypothetical protein | A5893_08865 | Not Available | Negative | 2133843 - 2134703 | 32734.3 |
| cystathionine gamma-synthase | A5893_08870 | Not Available | Negative | 2134727 - 2135839 | 40528.5 |
| aminofutalosine synthase mqne | A5893_08875 | Not Available | Positive | 2135950 - 2137143 | 46445.4 |
| phosphoglycerate mutase | A5893_08880 | Not Available | Positive | 2137148 - 2137774 | 23936.6 |
| radical sam protein | A5893_08885 | Not Available | Positive | 2137771 - 2138511 | 28116.1 |
| copper oxidase | A5893_08890 | Not Available | Negative | 2138552 - 2139001 | 16883.6 |
| electron transporter | A5893_08895 | Not Available | Negative | 2139003 - 2139650 | 24265.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
