Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | A5893_08800 | Not Available | Negative | 2117043 - 2118092 | 38287.9 |
| nad-dependent protein deacylase | A5893_08805 | Not Available | Positive | 2118325 - 2119017 | 25781.5 |
| ribose 5-phosphate isomerase a | A5893_08810 | Not Available | Positive | 2119093 - 2119758 | 23974.1 |
| lipoprotein abc transporter atp-binding protein | A5893_08815 | Not Available | Positive | 2119785 - 2120435 | 23873.0 |
| hypothetical protein | A5893_08820 | Not Available | Positive | 2120438 - 2121145 | 26843.1 |
| hypothetical protein | A5893_08825 | Not Available | Positive | 2121139 - 2121744 | 23918.1 |
| hypothetical protein | A5893_08830 | Not Available | Positive | 2121809 - 2123398 | 57444.6 |
| abc transporter atp-binding protein | A5893_08835 | Not Available | Negative | 2123540 - 2125264 | 65093.6 |
| 3'-5' exonuclease | A5893_08840 | Not Available | Negative | 2125264 - 2125968 | 27309.8 |
| transporter | A5893_08845 | Not Available | Positive | 2126252 - 2127592 | 51137.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
