Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase | A5893_08750 | Not Available | Negative | 2104204 - 2105340 | 42969.3 |
| histidinol-phosphate transaminase | A5893_08755 | Not Available | Negative | 2105333 - 2106385 | 39485.3 |
| histidinol dehydrogenase | A5893_08760 | Not Available | Negative | 2106466 - 2107761 | 46824.2 |
| atp phosphoribosyltransferase | A5893_08765 | Not Available | Negative | 2107848 - 2108699 | 30872.8 |
| acetyl-coa carboxylase subunit beta | A5893_08770 | Not Available | Negative | 2109043 - 2109888 | 31363.3 |
| class ii fructose-bisphosphate aldolase | A5893_08775 | Not Available | Positive | 2110028 - 2111107 | 39866.2 |
| chromosome segregation protein smc | A5893_08780 | Not Available | Negative | 2111204 - 2114737 | 136184.0 |
| hypothetical protein | A5893_08785 | Not Available | Negative | 2114907 - 2115101 | 6613.78 |
| rna polymerase subunit sigma-70 | A5893_08790 | Not Available | Positive | 2115309 - 2115884 | 22457.9 |
| protease do | A5893_08795 | Not Available | Positive | 2115881 - 2116975 | 40448.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
