Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | A5893_08700 | Not Available | Negative | 2095696 - 2096370 | 26345.8 |
| transporter | A5893_08705 | Not Available | Positive | 2096427 - 2097764 | 49996.2 |
| efflux transporter periplasmic adaptor subunit | A5893_08710 | Not Available | Positive | 2097795 - 2099144 | 48495.0 |
| glycerol-3-phosphate dehydrogenase | A5893_08715 | Not Available | Positive | 2099256 - 2100263 | 37456.6 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | A5893_08720 | Not Available | Negative | 2100430 - 2101017 | 22127.4 |
| hypothetical protein | A5893_08725 | Not Available | Negative | 2101014 - 2101319 | 12192.7 |
| hypothetical protein | A5893_08730 | Not Available | Negative | 2101312 - 2101557 | 9244.27 |
| imidazole glycerol phosphate synthase subunit hisf | A5893_08735 | Not Available | Negative | 2101573 - 2102355 | 28238.9 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | A5893_08740 | Not Available | Negative | 2102774 - 2103523 | 28029.8 |
| imidazole glycerol phosphate synthase subunit hish | A5893_08745 | Not Available | Negative | 2103525 - 2104121 | 22188.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
