Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 2088366 - 2088436 | Not Available |
| spore protein | A5893_08650 | Not Available | Positive | 2088467 - 2088637 | 6423.75 |
| hypothetical protein | A5893_08655 | Not Available | Negative | 2088701 - 2089627 | 34345.3 |
| plasmid stabilization protein | A5893_08660 | Not Available | Negative | 2089665 - 2089964 | 12108.5 |
| antitoxin | A5893_08665 | Not Available | Negative | 2089954 - 2090208 | 9723.56 |
| abc transporter permease | A5893_08670 | Not Available | Negative | 2090276 - 2091595 | 49051.3 |
| abc transporter atp-binding protein | A5893_08675 | Not Available | Negative | 2091603 - 2092505 | 34227.5 |
| rna helicase | A5893_08680 | Not Available | Positive | 2092928 - 2094160 | 46720.8 |
| fructose-6-phosphate aldolase | A5893_08690 | Not Available | Positive | 2094573 - 2095232 | 23526.4 |
| hypothetical protein | A5893_08695 | Not Available | Positive | 2095384 - 2095605 | 7661.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
