Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_08590 | Not Available | Negative | 2075217 - 2077283 | 79741.9 |
| hypothetical protein | A5893_08595 | Not Available | Negative | 2077285 - 2079342 | 79102.2 |
| hypothetical protein | A5893_08600 | Not Available | Negative | 2079332 - 2080132 | 29316.3 |
| metallophosphoesterase | A5893_08605 | Not Available | Positive | 2080229 - 2081257 | 39307.4 |
| diacylglycerol kinase | A5893_08610 | Not Available | Negative | 2081231 - 2082145 | 34425.3 |
| merr family transcriptional regulator | A5893_08615 | Not Available | Negative | 2082161 - 2082496 | 13250.2 |
| peptidase m23 | A5893_08620 | Not Available | Negative | 2082503 - 2083468 | 36587.3 |
| hypothetical protein | A5893_08625 | Not Available | Negative | 2083605 - 2084030 | 14526.4 |
| hypothetical protein | A5893_08635 | Not Available | Negative | 2085242 - 2087521 | 86531.1 |
| rna methyltransferase | A5893_08640 | Not Available | Positive | 2087569 - 2088315 | 27553.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
