Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nmra family transcriptional regulator | A5893_00450 | Not Available | Negative | 170316 - 171308 | 37949.2 |
| hypothetical protein | A5893_00455 | Not Available | Negative | 171305 - 171997 | 26172.0 |
| crp/fnr family transcriptional regulator | A5893_00460 | Not Available | Negative | 172079 - 172666 | 22952.5 |
| lytic transglycosylase | A5893_00465 | Not Available | Negative | 172698 - 174107 | 53341.7 |
| aspartyl/glutamyl-trna amidotransferase subunit a | A5893_00470 | Not Available | Negative | 174146 - 175579 | 52312.6 |
| preprotein translocase | A5893_00475 | Not Available | Negative | 175663 - 175857 | 7059.87 |
| twin-arginine translocation protein, tata/e family subunit | A5893_00480 | Not Available | Negative | 175884 - 176216 | 12338.8 |
| peptidase m23 | A5893_00485 | Not Available | Negative | 176307 - 177548 | 46439.8 |
| hypothetical protein | A5893_00490 | Not Available | Negative | 177568 - 178365 | 30219.1 |
| hypothetical protein | A5893_00495 | Not Available | Negative | 178319 - 180055 | 66910.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
