Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridylate synthase | A5893_08540 | Not Available | Negative | 2063832 - 2064509 | 26090.7 |
| phosphoribosylformylglycinamidine cyclo-ligase | A5893_08545 | Not Available | Positive | 2064804 - 2065982 | 43150.7 |
| aspartate aminotransferase | A5893_08550 | Not Available | Positive | 2066181 - 2067383 | 44720.1 |
| Tmrna,resume consensus sequence (at 92): aacaggcgaaaataacta | Not Available | Not Available | Positive | 2067470 - 2067864 | Not Available |
| hypothetical protein | A5893_08560 | Not Available | Positive | 2067986 - 2068585 | 22261.7 |
| beta-n-acetylhexosaminidase | A5893_08565 | Not Available | Positive | 2068850 - 2071138 | 86404.1 |
| hypothetical protein | A5893_08570 | Not Available | Positive | 2071145 - 2071759 | 23236.6 |
| sulfatase | A5893_08575 | Not Available | Negative | 2071767 - 2073635 | 71253.2 |
| hypothetical protein | A5893_08580 | Not Available | Negative | 2073695 - 2074375 | 24969.2 |
| methylglutaconyl-coa hydratase | A5893_08585 | Not Available | Negative | 2074442 - 2075212 | 28564.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
