Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48 | A5893_08440 | Not Available | Positive | 2043560 - 2044369 | 28985.9 |
| aminobenzoate synthetase | A5893_08445 | Not Available | Negative | 2044404 - 2045690 | 49290.6 |
| universal stress protein uspa | A5893_08450 | Not Available | Negative | 2045765 - 2046229 | 16849.7 |
| hydrolase nlp/p60 | A5893_08455 | Not Available | Positive | 2046346 - 2047134 | 29327.7 |
| hypothetical protein | A5893_08460 | Not Available | Positive | 2047336 - 2047992 | 23217.1 |
| carbamoyl phosphate synthase small subunit | A5893_08465 | Not Available | Negative | 2048056 - 2049156 | 40480.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | A5893_08470 | Not Available | Positive | 2049370 - 2050185 | 29488.9 |
| rna pseudouridine synthase | A5893_08475 | Not Available | Positive | 2050279 - 2050986 | 27259.1 |
| hypothetical protein | A5893_08480 | Not Available | Negative | 2050978 - 2051742 | 29130.8 |
| hypothetical protein | A5893_08485 | Not Available | Positive | 2051831 - 2053399 | 61397.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
