Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase xerd | A5893_08390 | Not Available | Negative | 2035581 - 2036480 | 34835.5 |
| hypothetical protein | A5893_08395 | Not Available | Negative | 2036489 - 2037286 | 31372.8 |
| 3-dehydroquinate dehydratase | A5893_08400 | Not Available | Positive | 2037370 - 2037786 | 15359.6 |
| glycosyl transferase family 2 | A5893_08405 | Not Available | Negative | 2037797 - 2038819 | 39277.1 |
| lipid a biosynthesis acyltransferase | A5893_08410 | Not Available | Negative | 2038812 - 2039696 | 34592.2 |
| hypothetical protein | A5893_08415 | Not Available | Positive | 2039736 - 2040347 | 24299.9 |
| magnesium and cobalt transport protein cora | A5893_08420 | Not Available | Positive | 2040363 - 2041505 | 44329.0 |
| hypothetical protein | A5893_08425 | Not Available | Positive | 2041582 - 2041968 | 14470.4 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | A5893_08430 | Not Available | Positive | 2042013 - 2042861 | 31028.7 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | A5893_08435 | Not Available | Positive | 2042902 - 2043555 | 23486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
