Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_08340 | Not Available | Negative | 2024748 - 2025065 | 12075.3 |
| homoserine o-succinyltransferase | A5893_08345 | Not Available | Positive | 2025391 - 2026335 | 36352.0 |
| hypothetical protein | A5893_08350 | Not Available | Negative | 2026379 - 2028286 | 71588.1 |
| 7-carboxy-7-deazaguanine synthase | A5893_08355 | Not Available | Negative | 2028320 - 2028901 | 21777.1 |
| phosphorylase | A5893_08360 | Not Available | Negative | 2029277 - 2030137 | 31630.2 |
| yigz family protein | A5893_08365 | Not Available | Negative | 2030134 - 2030748 | 23244.2 |
| hypothetical protein | A5893_08370 | Not Available | Negative | 2030738 - 2031595 | 31494.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase | A5893_08375 | Not Available | Negative | 2031595 - 2032638 | 38859.3 |
| hypothetical protein | A5893_08380 | Not Available | Positive | 2032701 - 2034620 | 73766.9 |
| hypothetical protein | A5893_08385 | Not Available | Positive | 2034628 - 2035464 | 31769.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
