Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | A5893_08290 | Not Available | Negative | 2011165 - 2011881 | 25873.1 |
| dna polymerase iii subunit epsilon | A5893_08295 | Not Available | Positive | 2011989 - 2013362 | 52352.5 |
| hypothetical protein | A5893_08300 | Not Available | Positive | 2013497 - 2013805 | 11601.4 |
| dna methyltransferase | A5893_08305 | Not Available | Positive | 2014466 - 2016061 | 59701.1 |
| hypothetical protein | A5893_08310 | Not Available | Positive | 2016054 - 2016314 | 9842.8 |
| hypothetical protein | A5893_08315 | Not Available | Positive | 2016307 - 2016762 | 17551.4 |
| hypothetical protein | A5893_08320 | Not Available | Positive | 2016759 - 2018219 | 55570.0 |
| hypothetical protein | A5893_08325 | Not Available | Positive | 2018223 - 2019203 | 38437.8 |
| dead/deah box helicase | A5893_08330 | Not Available | Positive | 2019200 - 2022427 | 121831.0 |
| sodium:alanine symporter | A5893_08335 | Not Available | Positive | 2023005 - 2024420 | 50400.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
