Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_08190 | Not Available | Positive | 1989226 - 1989441 | 8239.93 |
| hypothetical protein | A5893_08195 | Not Available | Negative | 1989662 - 1989859 | 7136.31 |
| hypothetical protein | A5893_08200 | Not Available | Negative | 1989943 - 1990854 | 34540.4 |
| aminotransferase class i and ii | A5893_08205 | Not Available | Positive | 1990974 - 1991765 | 29626.4 |
| hypothetical protein | A5893_08210 | Not Available | Positive | 1991743 - 1992126 | 14890.2 |
| hypothetical protein | A5893_08215 | Not Available | Negative | 1992143 - 1993414 | 49033.3 |
| dna-binding response regulator | A5893_08220 | Not Available | Negative | 1993417 - 1994082 | 25287.5 |
| hypothetical protein | A5893_08225 | Not Available | Negative | 1994401 - 1994679 | 10545.8 |
| hypothetical protein | A5893_08230 | Not Available | Negative | 1994770 - 1995981 | 47732.5 |
| peptidase m16 | A5893_08235 | Not Available | Positive | 1996162 - 1997397 | 47291.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
