Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 158206 - 158303 | Not Available |
| serine hydrolase | A5893_00405 | Not Available | Negative | 158105 - 159283 | 45256.7 |
| class ii fumarate hydratase | A5893_00410 | Not Available | Positive | 159432 - 160829 | 50220.3 |
| n-acetylmuramoyl-l-alanine amidase | A5893_00415 | Not Available | Positive | 160893 - 161711 | 30850.1 |
| peptidase s9 | A5893_00420 | Not Available | Positive | 161891 - 164254 | 89334.1 |
| ketosteroid isomerase | A5893_00425 | Not Available | Positive | 164263 - 164616 | 13727.4 |
| hypothetical protein | A5893_00430 | Not Available | Negative | 164646 - 165005 | 13512.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | A5893_00435 | Not Available | Negative | 165109 - 166413 | 48981.9 |
| zinc carboxypeptidase | A5893_00440 | Not Available | Positive | 166598 - 169120 | 95055.4 |
| mechanosensitive ion channel protein mscs | A5893_00445 | Not Available | Positive | 169261 - 170187 | 34518.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
