Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_17420 | Not Available | Negative | 1934241 - 1934768 | 20002.7 |
| hypothetical protein | A5893_17425 | Not Available | Negative | 1934908 - 1935411 | 19320.1 |
| hypothetical protein | A5893_17430 | Not Available | Negative | 1935553 - 1936017 | 17313.7 |
| dna polymerase iv | A5893_07950 | Not Available | Positive | 1936587 - 1937774 | 44832.2 |
| dna polymerase iii subunit alpha | A5893_07955 | Not Available | Positive | 1937779 - 1940754 | 114621.0 |
| hypothetical protein | A5893_07960 | Not Available | Positive | 1940801 - 1941250 | 16620.0 |
| hypothetical protein | A5893_07965 | Not Available | Positive | 1941250 - 1941717 | 17413.1 |
| molecular chaperone dnaj | A5893_07970 | Not Available | Negative | 1941778 - 1942947 | 42026.9 |
| nucleotide exchange factor grpe | A5893_07975 | Not Available | Negative | 1943042 - 1943635 | 22585.9 |
| phosphonate abc transporter atp-binding protein | A5893_07980 | Not Available | Negative | 1943757 - 1944437 | 25329.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
