Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_07855 | Not Available | Negative | 1911926 - 1912747 | 30199.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | A5893_07860 | Not Available | Negative | 1912899 - 1914203 | 47504.1 |
| hypothetical protein | A5893_07865 | Not Available | Negative | 1914289 - 1915011 | 27449.6 |
| hypothetical protein | A5893_07870 | Not Available | Positive | 1915214 - 1916659 | 55711.4 |
| uridine kinase | A5893_07875 | Not Available | Negative | 1916661 - 1917299 | 24733.7 |
| peptidoglycan-binding protein | A5893_07880 | Not Available | Negative | 1917289 - 1918206 | 34093.1 |
| hypothetical protein | A5893_07885 | Not Available | Negative | 1918241 - 1918990 | 29326.3 |
| serine protease | A5893_07890 | Not Available | Positive | 1919009 - 1920343 | 48223.0 |
| mannose-1-phosphate guanylyltransferase | A5893_07895 | Not Available | Negative | 1920406 - 1921491 | 41033.2 |
| d-arabinose 5-phosphate isomerase | A5893_07900 | Not Available | Negative | 1921502 - 1922467 | 34913.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
