Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | A5893_07800 | Not Available | Negative | 1897925 - 1899316 | 52219.7 |
| imp dehydrogenase | A5893_07810 | Not Available | Positive | 1899945 - 1901414 | 52076.0 |
| rrf2 family transcriptional regulator | A5893_07815 | Not Available | Negative | 1901480 - 1901923 | 16585.5 |
| energy transducer tonb | A5893_07820 | Not Available | Positive | 1902236 - 1905145 | 106570.0 |
| aldo/keto reductase | A5893_07825 | Not Available | Positive | 1905244 - 1906137 | 33950.9 |
| rossman fold protein, tigr00730 family | A5893_07830 | Not Available | Positive | 1906170 - 1906757 | 21863.0 |
| glycosyl transferase family 2 | A5893_07835 | Not Available | Negative | 1906830 - 1908290 | 56081.0 |
| glycosyl hydrolase | A5893_07840 | Not Available | Negative | 1908306 - 1909010 | 26178.0 |
| fes-binding protein | A5893_07845 | Not Available | Negative | 1909010 - 1910548 | 58326.7 |
| nadh dehydrogenase | A5893_07850 | Not Available | Negative | 1910574 - 1911893 | 50400.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
