Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_07750 | Not Available | Positive | 1887782 - 1888726 | 37598.7 |
| polysaccharide biosynthesis protein | A5893_07755 | Not Available | Positive | 1888723 - 1890078 | 51158.9 |
| glycosyl transferase | A5893_07760 | Not Available | Positive | 1890080 - 1890904 | 32863.4 |
| hypothetical protein | A5893_07765 | Not Available | Negative | 1890901 - 1891437 | 19722.8 |
| fasciclin | A5893_07770 | Not Available | Positive | 1891596 - 1892195 | 20469.8 |
| mfs transporter | A5893_07775 | Not Available | Positive | 1892295 - 1893518 | 44156.2 |
| cl- channel voltage-gated family protein | A5893_07780 | Not Available | Positive | 1893526 - 1895304 | 65501.7 |
| coproporphyrinogen iii oxidase | A5893_07785 | Not Available | Positive | 1895312 - 1896223 | 35064.3 |
| ai-2e family transporter | A5893_07790 | Not Available | Negative | 1896292 - 1897407 | 41489.7 |
| pp_01635 | A5893_07795 | Not Available | Negative | 1897491 - 1897844 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
