Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | A5893_07700 | Not Available | Negative | 1878846 - 1880285 | 53479.4 |
| glycosyl transferase | A5893_07705 | Not Available | Negative | 1880397 - 1881566 | 44729.2 |
| glycosyl transferase | A5893_07710 | Not Available | Negative | 1881568 - 1882479 | 34659.8 |
| hypothetical protein | A5893_07715 | Not Available | Positive | 1882538 - 1883047 | 19259.7 |
| response regulator receiver protein | A5893_07720 | Not Available | Positive | 1883095 - 1884174 | 41042.6 |
| hypothetical protein | A5893_07725 | Not Available | Positive | 1884177 - 1884515 | 12462.2 |
| hypothetical protein | A5893_07730 | Not Available | Positive | 1884515 - 1885063 | 21170.7 |
| hypothetical protein | A5893_07735 | Not Available | Positive | 1885139 - 1886035 | 34735.1 |
| glycosyl transferase family 2 | A5893_07740 | Not Available | Positive | 1886089 - 1886868 | 30998.4 |
| glycosyl transferase family 2 | A5893_07745 | Not Available | Positive | 1886871 - 1887758 | 33790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
