Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_07650 | Not Available | Negative | 1866030 - 1867280 | 46913.9 |
| glutamine-hydrolyzing gmp synthase | A5893_07655 | Not Available | Negative | 1867440 - 1868972 | 56548.7 |
| hypothetical protein | A5893_07660 | Not Available | Positive | 1869291 - 1869968 | 24793.4 |
| bleomycin resistance protein | A5893_07665 | Not Available | Positive | 1869992 - 1870357 | 13765.2 |
| peptidase s9 | A5893_07670 | Not Available | Positive | 1870403 - 1872436 | 76387.0 |
| isoleucine--trna ligase | A5893_07675 | Not Available | Positive | 1872630 - 1876055 | 130880.0 |
| molecular chaperone dnak | A5893_07680 | Not Available | Positive | 1876058 - 1876444 | 14454.0 |
| peptidase a8 | A5893_07685 | Not Available | Positive | 1876444 - 1877046 | 22773.1 |
| signal peptide protein | A5893_07690 | Not Available | Positive | 1877213 - 1877644 | 16051.4 |
| hypothetical protein | A5893_07695 | Not Available | Positive | 1877651 - 1878667 | 37299.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
