Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_07600 | Not Available | Positive | 1859429 - 1859830 | 15646.5 |
| hypothetical protein | A5893_07605 | Not Available | Positive | 1859909 - 1860400 | 18780.9 |
| methyltransferase | A5893_07610 | Not Available | Positive | 1860646 - 1861359 | 27041.6 |
| phosphodiesterase | A5893_07615 | Not Available | Positive | 1861359 - 1861853 | 18684.4 |
| fructose-bisphosphatase | A5893_07620 | Not Available | Positive | 1861881 - 1862900 | 37237.5 |
| ribonuclease hi | A5893_07625 | Not Available | Negative | 1862897 - 1863367 | 17599.2 |
| Trna-his | Not Available | Not Available | Positive | 1863518 - 1863591 | Not Available |
| plasmid maintenance system antidote protein | A5893_07635 | Not Available | Positive | 1863719 - 1864222 | 19604.2 |
| hypothetical protein | A5893_07640 | Not Available | Positive | 1864224 - 1864874 | 25175.1 |
| rna methyltransferase | A5893_07645 | Not Available | Negative | 1864864 - 1866027 | 44836.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
