Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 144854 - 144925 | Not Available |
| elongation factor tu | A5893_00355 | Not Available | Positive | 144983 - 146170 | 43042.0 |
| Trna-trp | Not Available | Not Available | Positive | 146274 - 146347 | Not Available |
| elongation factor tu | A5893_00365 | Not Available | Positive | 146362 - 146556 | 7107.78 |
| transcription termination/antitermination factor nusg | A5893_00370 | Not Available | Positive | 146567 - 147109 | 20546.3 |
| 50s ribosomal protein l11 | A5893_00375 | Not Available | Positive | 147248 - 147691 | 15697.2 |
| 50s ribosomal protein l1 | A5893_00380 | Not Available | Positive | 147715 - 148413 | 24694.0 |
| 50s ribosomal protein l10 | A5893_00385 | Not Available | Positive | 148418 - 148942 | 19199.4 |
| 50s ribosomal protein l7/l12 | A5893_00390 | Not Available | Positive | 149000 - 149377 | 12897.5 |
| dna-directed rna polymerase subunit beta | A5893_00395 | Not Available | Positive | 149526 - 153326 | 142217.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
