Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_07550 | Not Available | Positive | 1846910 - 1848757 | 67906.1 |
| hypothetical protein | A5893_07555 | Not Available | Positive | 1848897 - 1850060 | 42608.1 |
| Trna-ser | Not Available | Not Available | Positive | 1850540 - 1850626 | Not Available |
| transmembrane hd family protein | A5893_07565 | Not Available | Negative | 1850715 - 1852796 | 79564.2 |
| acetyl-coa acetyltransferase | A5893_07570 | Not Available | Positive | 1853006 - 1854184 | 41302.6 |
| hypothetical protein | A5893_07575 | Not Available | Positive | 1854193 - 1855104 | 35139.8 |
| hypothetical protein | A5893_07580 | Not Available | Negative | 1855105 - 1855467 | 13682.5 |
| mfs transporter | A5893_07585 | Not Available | Positive | 1855625 - 1857004 | 50486.4 |
| amino acid transporter | A5893_07590 | Not Available | Positive | 1857017 - 1858576 | 57323.4 |
| dolichyl-phosphate beta-d-mannosyltransferase | A5893_07595 | Not Available | Positive | 1858610 - 1859335 | 27570.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
