Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | A5893_07400 | Not Available | Positive | 1815056 - 1816066 | 38875.5 |
| aldose epimerase | A5893_07405 | Not Available | Positive | 1816072 - 1816938 | 33187.7 |
| dna polymerase subunit beta | A5893_07410 | Not Available | Positive | 1816971 - 1817267 | 11370.7 |
| hypothetical protein | A5893_07415 | Not Available | Positive | 1817260 - 1817604 | 13738.3 |
| beta-galactosidase | A5893_07420 | Not Available | Positive | 1817817 - 1819178 | 52510.0 |
| methyltransferase | A5893_07425 | Not Available | Negative | 1819183 - 1819875 | 26494.1 |
| patatin | A5893_07430 | Not Available | Negative | 1819875 - 1820894 | 37855.0 |
| hypothetical protein | A5893_07435 | Not Available | Negative | 1820942 - 1821901 | 36241.4 |
| hypothetical protein | A5893_07440 | Not Available | Negative | 1821950 - 1822279 | 12639.1 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | A5893_07445 | Not Available | Negative | 1822276 - 1822869 | 22685.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
