Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate lyase | A5893_07350 | Not Available | Negative | 1804295 - 1805638 | 51181.8 |
| hypothetical protein | A5893_07355 | Not Available | Positive | 1805775 - 1806434 | 25836.6 |
| transporter | A5893_07360 | Not Available | Positive | 1806434 - 1807774 | 49849.5 |
| efflux transporter periplasmic adaptor subunit | A5893_07365 | Not Available | Positive | 1807801 - 1808892 | 39769.0 |
| copper transporter | A5893_07370 | Not Available | Positive | 1808932 - 1812315 | 125463.0 |
| glycoside hydrolase | A5893_07375 | Not Available | Positive | 1812422 - 1812961 | 20825.1 |
| redoxin | A5893_07380 | Not Available | Positive | 1813006 - 1813488 | 18741.9 |
| redoxin | A5893_07385 | Not Available | Positive | 1813491 - 1814117 | 23327.1 |
| hypothetical protein | A5893_07390 | Not Available | Positive | 1814083 - 1814718 | 24199.2 |
| hypothetical protein | A5893_07395 | Not Available | Positive | 1814740 - 1815006 | 10338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
