Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase iscs | A5893_07300 | Not Available | Negative | 1796020 - 1797231 | 44115.8 |
| methylmalonyl-coa epimerase | A5893_07305 | Not Available | Positive | 1797350 - 1797754 | 15165.4 |
| hypothetical protein | A5893_07310 | Not Available | Positive | 1797760 - 1798446 | 25699.2 |
| 50s ribosomal protein l31 | A5893_07315 | Not Available | Positive | 1798524 - 1798772 | 9666.64 |
| glucose-1-phosphate thymidylyltransferase | A5893_07320 | Not Available | Positive | 1798842 - 1800017 | 44255.5 |
| triose-phosphate isomerase | A5893_07325 | Not Available | Positive | 1800028 - 1800798 | 27965.2 |
| ribosomal protein l11 methyltransferase | A5893_07330 | Not Available | Positive | 1801006 - 1801842 | 31775.8 |
| peptidoglycan synthetase | A5893_07335 | Not Available | Positive | 1801849 - 1803213 | 51452.0 |
| transcriptional regulator | A5893_07340 | Not Available | Positive | 1803275 - 1803616 | 13099.0 |
| thioredoxin | A5893_07345 | Not Available | Negative | 1803662 - 1804213 | 20193.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
