Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase | A5893_07245 | Not Available | Positive | 1786831 - 1787853 | 37835.2 |
| doxx family protein | A5893_07250 | Not Available | Positive | 1788167 - 1788505 | 13095.0 |
| fatty acid desaturase | A5893_07255 | Not Available | Positive | 1788621 - 1789604 | 37751.2 |
| hypothetical protein | A5893_07260 | Not Available | Negative | 1789669 - 1790415 | 28047.5 |
| hypothetical protein | A5893_07265 | Not Available | Positive | 1790492 - 1790725 | 9117.74 |
| hypothetical protein | A5893_07270 | Not Available | Positive | 1790710 - 1791012 | 12062.7 |
| mfs transporter | A5893_07280 | Not Available | Negative | 1791673 - 1792812 | 41350.1 |
| amp-binding protein | A5893_07285 | Not Available | Negative | 1793032 - 1794945 | 71764.1 |
| heme biosynthesis protein hemy | A5893_07290 | Not Available | Negative | 1795064 - 1795390 | 11734.8 |
| fe-s cluster assembly scaffold iscu | A5893_07295 | Not Available | Negative | 1795473 - 1795886 | 14905.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
