Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna amidotransferase | A5893_07135 | Not Available | Positive | 1763545 - 1763991 | 16523.0 |
| alpha/beta hydrolase | A5893_07140 | Not Available | Positive | 1764115 - 1764876 | 29041.4 |
| cbs domain-containing protein | A5893_07145 | Not Available | Positive | 1764876 - 1765538 | 24621.6 |
| nad kinase | A5893_07150 | Not Available | Positive | 1765548 - 1766429 | 32987.8 |
| hypothetical protein | A5893_07155 | Not Available | Positive | 1766439 - 1767227 | 29830.2 |
| isoprenyl transferase | A5893_07160 | Not Available | Positive | 1767250 - 1767990 | 28303.0 |
| outer membrane protein assembly factor bama | A5893_07165 | Not Available | Positive | 1768051 - 1770567 | 94068.0 |
| hypothetical protein | A5893_07170 | Not Available | Positive | 1770595 - 1771122 | 20188.4 |
| hypothetical protein | A5893_07175 | Not Available | Positive | 1771175 - 1771687 | 18890.9 |
| glutamate racemase | A5893_07180 | Not Available | Positive | 1771916 - 1772725 | 29834.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
