Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | A5893_07085 | Not Available | Positive | 1749532 - 1751322 | 65739.0 |
| hypothetical protein | A5893_07090 | Not Available | Positive | 1751680 - 1752144 | 16979.6 |
| arylsulfatase | A5893_07095 | Not Available | Positive | 1752726 - 1754153 | 52794.2 |
| hypothetical protein | A5893_07100 | Not Available | Positive | 1754281 - 1755537 | 48681.1 |
| hypothetical protein | A5893_07105 | Not Available | Positive | 1755869 - 1757275 | 52231.0 |
| hypothetical protein | A5893_07110 | Not Available | Positive | 1757575 - 1758633 | 38892.1 |
| hypothetical protein | A5893_07115 | Not Available | Negative | 1758696 - 1760528 | 70017.8 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | A5893_07120 | Not Available | Positive | 1760886 - 1761617 | 27278.9 |
| porin | A5893_07125 | Not Available | Positive | 1761614 - 1762375 | 28983.5 |
| nad(p)-dependent oxidoreductase | A5893_07130 | Not Available | Positive | 1762655 - 1763422 | 28136.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
