Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin | A5893_00300 | Not Available | Negative | 137873 - 139627 | 66385.3 |
| hypothetical protein | A5893_00305 | Not Available | Positive | 139856 - 140674 | 31334.5 |
| adenine phosphoribosyltransferase | A5893_00310 | Not Available | Positive | 140674 - 141204 | 19930.3 |
| acyl-coa dehydrogenase | A5893_00315 | Not Available | Positive | 141330 - 142496 | 42281.9 |
| 30s ribosomal protein s21 | A5893_00320 | Not Available | Positive | 142685 - 142873 | 7311.05 |
| integrase | A5893_00325 | Not Available | Positive | 142947 - 143825 | 33680.0 |
| 30s ribosomal protein s30 | A5893_00330 | Not Available | Positive | 143841 - 144182 | 13105.0 |
| Trna-thr | Not Available | Not Available | Positive | 144347 - 144419 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 144511 - 144594 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 144673 - 144745 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
