Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_07030 | Not Available | Positive | 1736746 - 1737414 | 25353.7 |
| response regulator receiver protein | A5893_07035 | Not Available | Negative | 1737411 - 1737773 | 13528.4 |
| chemotaxis protein cheb | A5893_07040 | Not Available | Negative | 1737786 - 1738364 | 21457.8 |
| chemotaxis protein cher | A5893_07045 | Not Available | Negative | 1738346 - 1739170 | 31979.4 |
| histidine kinase | A5893_07055 | Not Available | Negative | 1739546 - 1743109 | 133699.0 |
| hybrid sensor histidine kinase/response regulator | A5893_07060 | Not Available | Negative | 1743126 - 1744592 | 55933.6 |
| marr family transcriptional regulator | A5893_07065 | Not Available | Positive | 1744762 - 1745193 | 16541.8 |
| 3-hydroxyacyl-coa dehydrogenase | A5893_07070 | Not Available | Positive | 1745208 - 1747613 | 88967.5 |
| four helix bundle protein | A5893_07075 | Not Available | Positive | 1747677 - 1748030 | 13349.1 |
| acetyl-coa acetyltransferase | A5893_07080 | Not Available | Positive | 1748237 - 1749412 | 41822.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
