Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine kinase | A5893_06980 | Not Available | Positive | 1724755 - 1725606 | 32167.2 |
| hypothetical protein | A5893_06985 | Not Available | Positive | 1725714 - 1729475 | 135540.0 |
| phosphoribosyltransferase | A5893_06990 | Not Available | Positive | 1729618 - 1730127 | 19353.9 |
| shikimate kinase | A5893_06995 | Not Available | Negative | 1730172 - 1730696 | 19531.9 |
| dash family cryptochrome | A5893_07000 | Not Available | Negative | 1730742 - 1732130 | 54827.3 |
| abc transporter permease | A5893_07005 | Not Available | Negative | 1732192 - 1733247 | 39100.7 |
| doxx family protein | A5893_07010 | Not Available | Negative | 1733247 - 1734407 | 43850.7 |
| hypothetical protein | A5893_07015 | Not Available | Negative | 1734409 - 1734951 | 20619.0 |
| dihydropteroate synthase | A5893_07020 | Not Available | Positive | 1735007 - 1735864 | 31606.4 |
| hypothetical protein | A5893_07025 | Not Available | Positive | 1735900 - 1736691 | 29783.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
