Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_06930 | Not Available | Positive | 1714005 - 1714355 | 12990.8 |
| methionine sulfoxide reductase b | A5893_06935 | Not Available | Positive | 1714403 - 1714768 | 13587.0 |
| glyoxalase | A5893_06940 | Not Available | Negative | 1714776 - 1715270 | 18446.9 |
| hypothetical protein | A5893_06945 | Not Available | Negative | 1715410 - 1716360 | 35221.0 |
| peptidase m61 | A5893_06950 | Not Available | Negative | 1716442 - 1718208 | 66312.7 |
| hypothetical protein | A5893_06955 | Not Available | Positive | 1718331 - 1718816 | 18785.7 |
| efflux transporter periplasmic adaptor subunit | A5893_06960 | Not Available | Positive | 1718813 - 1719886 | 38550.9 |
| acriflavin resistance protein | A5893_06965 | Not Available | Positive | 1719892 - 1722990 | 113765.0 |
| transporter | A5893_06970 | Not Available | Positive | 1722993 - 1724303 | 49164.5 |
| response regulator receiver protein | A5893_06975 | Not Available | Positive | 1724363 - 1724755 | 14978.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
