Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate kinase | A5893_06880 | Not Available | Positive | 1706163 - 1707476 | 48502.4 |
| diaminopimelate decarboxylase | A5893_06885 | Not Available | Positive | 1707489 - 1708691 | 44861.6 |
| glycosyl transferase | A5893_06890 | Not Available | Positive | 1708672 - 1709676 | 38245.4 |
| hypothetical protein | A5893_06895 | Not Available | Negative | 1709682 - 1709978 | 11770.5 |
| hypothetical protein | A5893_06900 | Not Available | Negative | 1709963 - 1710199 | 8929.82 |
| atpase | A5893_06905 | Not Available | Negative | 1710282 - 1710671 | 14803.1 |
| hypothetical protein | A5893_06910 | Not Available | Negative | 1710857 - 1711069 | 7398.36 |
| hypothetical protein | A5893_06915 | Not Available | Negative | 1711152 - 1711961 | 30407.9 |
| acyl-coa dehydrogenase | A5893_06920 | Not Available | Negative | 1711983 - 1713188 | 44458.7 |
| hypothetical protein | A5893_06925 | Not Available | Positive | 1713472 - 1713837 | 14027.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
