Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-shock protein hsp70 | A5893_06830 | Not Available | Negative | 1696597 - 1698435 | 67317.8 |
| dihydroorotase | A5893_06835 | Not Available | Negative | 1698512 - 1699846 | 49803.2 |
| dead/deah box helicase | A5893_06840 | Not Available | Positive | 1700076 - 1701407 | 50221.4 |
| hypothetical protein | A5893_06845 | Not Available | Positive | 1701412 - 1701678 | 10003.9 |
| gliding motility protein gldc | A5893_06850 | Not Available | Positive | 1701722 - 1702054 | 13024.5 |
| hypothetical protein | A5893_06855 | Not Available | Positive | 1702143 - 1702685 | 21866.9 |
| abc transporter permease | A5893_06860 | Not Available | Positive | 1702723 - 1703382 | 24716.6 |
| abc transporter permease | A5893_06865 | Not Available | Positive | 1703396 - 1704061 | 25072.1 |
| ccmd family protein | A5893_06870 | Not Available | Positive | 1704061 - 1704267 | 7941.26 |
| glutamate dehydrogenase | A5893_06875 | Not Available | Positive | 1704422 - 1705858 | 52487.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
