Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_06770 | Not Available | Positive | 1680710 - 1681936 | 45376.5 |
| hypothetical protein | A5893_06775 | Not Available | Positive | 1681929 - 1682912 | 35602.4 |
| dna repair protein reco | A5893_06785 | Not Available | Negative | 1685017 - 1685739 | 28143.4 |
| hypothetical protein | A5893_06790 | Not Available | Negative | 1685740 - 1687998 | 82099.8 |
| fis family transcriptional regulator | A5893_06795 | Not Available | Positive | 1688081 - 1690372 | 86238.0 |
| hypothetical protein | A5893_06800 | Not Available | Negative | 1690379 - 1690570 | 7346.47 |
| cyclophilin | A5893_06810 | Not Available | Positive | 1691955 - 1692416 | 16790.7 |
| hypothetical protein | A5893_06815 | Not Available | Positive | 1692427 - 1692975 | 19906.7 |
| penicillin-binding protein 1c | A5893_06820 | Not Available | Negative | 1693027 - 1695417 | 90420.1 |
| hypothetical protein | A5893_06825 | Not Available | Negative | 1695707 - 1696348 | 23801.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
