Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolb protein precursor | A5893_06715 | Not Available | Negative | 1667332 - 1670505 | 117760.0 |
| transglycosylase | A5893_06720 | Not Available | Negative | 1670595 - 1673066 | 94269.0 |
| amidohydrolase | A5893_06725 | Not Available | Negative | 1673278 - 1674054 | 30531.7 |
| methionine aminotransferase | A5893_06730 | Not Available | Negative | 1674075 - 1675220 | 43719.7 |
| hypothetical protein | A5893_06735 | Not Available | Positive | 1675341 - 1676114 | 28596.3 |
| hypothetical protein | A5893_06740 | Not Available | Negative | 1676132 - 1676566 | 17230.6 |
| hypothetical protein | A5893_06745 | Not Available | Negative | 1676570 - 1677184 | 23481.9 |
| rna polymerase subunit sigma | A5893_06750 | Not Available | Negative | 1677216 - 1677764 | 21696.0 |
| transketolase | A5893_06760 | Not Available | Negative | 1678890 - 1679735 | 30885.9 |
| hypothetical protein | A5893_06765 | Not Available | Positive | 1679942 - 1680700 | 26740.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
