Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase | A5893_06615 | Not Available | Negative | 1644367 - 1644783 | 16361.0 |
| aminodeoxychorismate lyase | A5893_06620 | Not Available | Negative | 1644783 - 1645829 | 40213.6 |
| rhodanese | A5893_06625 | Not Available | Negative | 1645877 - 1646185 | 11552.2 |
| serine/threonine protein kinase | A5893_06630 | Not Available | Negative | 1646188 - 1646955 | 28053.0 |
| d-alanine--d-alanine ligase | A5893_06635 | Not Available | Positive | 1647107 - 1648093 | 36974.0 |
| pseudouridylate synthase | A5893_06640 | Not Available | Negative | 1648128 - 1649864 | 65930.1 |
| murein transglycosylase | A5893_06645 | Not Available | Positive | 1650083 - 1650838 | 28898.2 |
| hypothetical protein | A5893_06650 | Not Available | Negative | 1650899 - 1651789 | 34855.5 |
| twitching motility protein pilt | A5893_06655 | Not Available | Negative | 1651860 - 1652279 | 15788.2 |
| hypothetical protein | A5893_06660 | Not Available | Negative | 1652276 - 1652530 | 9816.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
