Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase | A5893_06565 | Not Available | Negative | 1631811 - 1632653 | 31494.5 |
| threonine aldolase | A5893_06570 | Not Available | Positive | 1632971 - 1633990 | 37379.3 |
| hypothetical protein | A5893_06575 | Not Available | Negative | 1633973 - 1635259 | 49437.0 |
| biotin carboxylase | A5893_06580 | Not Available | Positive | 1635418 - 1636905 | 54960.1 |
| riboflavin synthase subunit alpha | A5893_06585 | Not Available | Positive | 1636918 - 1637511 | 21508.7 |
| hypothetical protein | A5893_06590 | Not Available | Positive | 1637680 - 1638855 | 46707.6 |
| hypothetical protein | A5893_06595 | Not Available | Negative | 1638852 - 1639313 | 17370.5 |
| dna gyrase subunit a | A5893_06600 | Not Available | Positive | 1639511 - 1642132 | 98303.5 |
| acetyltransferase | A5893_06605 | Not Available | Positive | 1642156 - 1643334 | 44281.9 |
| ribonuclease bn | A5893_06610 | Not Available | Negative | 1643387 - 1644367 | 37561.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
