Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | A5893_06365 | Not Available | Negative | 1588118 - 1589095 | 36853.2 |
| pp_01354 | A5893_06370 | Not Available | Negative | 1589203 - 1589655 | Not Available |
| outer membrane chaperone skp | A5893_06375 | Not Available | Negative | 1589739 - 1590350 | 22344.2 |
| thiol reductase thioredoxin | A5893_06380 | Not Available | Negative | 1590462 - 1590782 | 11649.2 |
| hypothetical protein | A5893_06385 | Not Available | Positive | 1590922 - 1595949 | 184562.0 |
| hypothetical protein | A5893_06390 | Not Available | Positive | 1595951 - 1598242 | 86552.6 |
| hypothetical protein | A5893_06395 | Not Available | Positive | 1598276 - 1598968 | 26721.3 |
| 30s ribosomal protein s6 | A5893_06400 | Not Available | Positive | 1599100 - 1599462 | 13685.6 |
| 30s ribosomal protein s18 | A5893_06405 | Not Available | Positive | 1599462 - 1599725 | 10159.6 |
| 50s ribosomal protein l9 | A5893_06410 | Not Available | Positive | 1599739 - 1600182 | 16049.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
