Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 1574755 - 1574827 | Not Available |
| hypothetical protein | A5893_06315 | Not Available | Negative | 1574907 - 1577075 | 81074.9 |
| hypothetical protein | A5893_06320 | Not Available | Negative | 1577440 - 1578516 | 42139.4 |
| potassium transporter trka | A5893_06325 | Not Available | Negative | 1578735 - 1580498 | 64132.9 |
| n-acetylglucosamine kinase | A5893_06330 | Not Available | Negative | 1580721 - 1581575 | 32309.5 |
| hypothetical protein | A5893_06340 | Not Available | Positive | 1582795 - 1584027 | 47585.2 |
| mbl fold hydrolase | A5893_06345 | Not Available | Negative | 1584173 - 1585579 | 52730.4 |
| mannosyltransferase | A5893_06350 | Not Available | Negative | 1585618 - 1586733 | 42228.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | A5893_06355 | Not Available | Negative | 1586820 - 1587638 | 29975.7 |
| rna-binding protein | A5893_06360 | Not Available | Positive | 1587711 - 1588109 | 15039.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
