Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | A5893_06260 | Not Available | Negative | 1564881 - 1565759 | 33750.8 |
| malate dehydrogenase | A5893_06265 | Not Available | Positive | 1566020 - 1566958 | 33368.3 |
| clan aa aspartic protease | A5893_06270 | Not Available | Positive | 1566965 - 1567396 | 16009.6 |
| sec-independent protein translocase tatc | A5893_06275 | Not Available | Positive | 1567405 - 1567818 | 15948.1 |
| hypothetical protein | A5893_06280 | Not Available | Positive | 1567865 - 1568755 | 33607.4 |
| hypothetical protein | A5893_06285 | Not Available | Positive | 1568782 - 1569600 | 30568.3 |
| cystathionine beta-synthase | A5893_06290 | Not Available | Positive | 1569834 - 1571195 | 49999.9 |
| hypothetical protein | A5893_06295 | Not Available | Negative | 1571578 - 1572210 | 24021.2 |
| cob--com heterodisulfide reductase | A5893_06300 | Not Available | Negative | 1572259 - 1573053 | 29262.4 |
| fe-s oxidoreductase | A5893_06305 | Not Available | Negative | 1573216 - 1574517 | 48843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
