Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit h | A5893_06160 | Not Available | Positive | 1546320 - 1547390 | 39853.0 |
| 4fe-4s ferredoxin | A5893_06165 | Not Available | Positive | 1547640 - 1548227 | 21738.4 |
| nadh dehydrogenase | A5893_06170 | Not Available | Positive | 1548227 - 1548775 | 20153.5 |
| nadh-quinone oxidoreductase subunit k | A5893_06175 | Not Available | Positive | 1548772 - 1549077 | 11048.1 |
| nadh dehydrogenase | A5893_06180 | Not Available | Positive | 1549077 - 1551122 | 77677.0 |
| oxidoreductase | A5893_06185 | Not Available | Positive | 1551122 - 1552717 | 58891.1 |
| hypothetical protein | A5893_06190 | Not Available | Positive | 1552718 - 1554178 | 53458.6 |
| hypothetical protein | A5893_06195 | Not Available | Positive | 1554228 - 1554686 | 16904.2 |
| hypothetical protein | A5893_06200 | Not Available | Positive | 1554740 - 1555168 | 15384.5 |
| organic hydroperoxide resistance protein | A5893_06205 | Not Available | Negative | 1555218 - 1555631 | 14436.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
