Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | A5893_06110 | Not Available | Positive | 1539770 - 1540915 | 43863.0 |
| short-chain dehydrogenase | A5893_06115 | Not Available | Positive | 1540899 - 1541693 | 29580.9 |
| fasciclin | A5893_06120 | Not Available | Positive | 1542073 - 1542630 | 19610.1 |
| hypothetical protein | A5893_06125 | Not Available | Negative | 1542825 - 1543403 | 22634.8 |
| rna polymerase subunit sigma-70 | A5893_06130 | Not Available | Negative | 1543393 - 1543902 | 20170.6 |
| hypothetical protein | A5893_06135 | Not Available | Positive | 1544080 - 1544277 | 7320.84 |
| plasmid stabilization protein | A5893_06140 | Not Available | Negative | 1544263 - 1544550 | 11212.6 |
| hypothetical protein | A5893_06145 | Not Available | Positive | 1545061 - 1545591 | 21171.4 |
| hypothetical protein | A5893_06150 | Not Available | Positive | 1545645 - 1545845 | 7515.13 |
| transcriptional regulator | A5893_06155 | Not Available | Positive | 1545847 - 1546152 | 11475.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
