Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | A5893_06060 | Not Available | Positive | 1524875 - 1527127 | 84399.8 |
| excinuclease abc subunit c | A5893_06065 | Not Available | Positive | 1527187 - 1528995 | 69935.5 |
| hypothetical protein | A5893_06070 | Not Available | Negative | 1529024 - 1529974 | 36049.3 |
| hypothetical protein | A5893_06075 | Not Available | Negative | 1529977 - 1531503 | 55010.6 |
| gliding motility protein gldl | A5893_06080 | Not Available | Negative | 1531552 - 1532355 | 28652.2 |
| gliding motility-associated lipoprotein | A5893_06085 | Not Available | Negative | 1532410 - 1533744 | 50459.6 |
| uroporphyrinogen-iii synthase | A5893_06090 | Not Available | Negative | 1534018 - 1534785 | 29092.2 |
| hypothetical protein | A5893_06095 | Not Available | Negative | 1534791 - 1535765 | 37743.7 |
| hypothetical protein | A5893_06100 | Not Available | Negative | 1535766 - 1537478 | 64891.4 |
| hypothetical protein | A5893_06105 | Not Available | Negative | 1537565 - 1539598 | 78504.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
