Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_00200 | Not Available | Negative | 116894 - 117949 | 38638.0 |
| hypothetical protein | A5893_00205 | Not Available | Negative | 118122 - 118940 | 30315.5 |
| glycine--trna ligase | A5893_00210 | Not Available | Negative | 119318 - 120883 | 60392.8 |
| hypothetical protein | A5893_00215 | Not Available | Negative | 120949 - 121521 | 20955.3 |
| s1/p1 nuclease | A5893_00220 | Not Available | Negative | 121637 - 122602 | 37506.7 |
| 30s ribosomal protein s20 | A5893_00225 | Not Available | Positive | 122747 - 122998 | 9528.85 |
| hypothetical protein | A5893_00230 | Not Available | Positive | 123202 - 123903 | 25926.7 |
| phenylalanine--trna ligase subunit beta | A5893_00235 | Not Available | Positive | 124100 - 126496 | 88593.3 |
| hypothetical protein | A5893_00240 | Not Available | Positive | 126688 - 126978 | 11144.7 |
| cell division protein zapa | A5893_00245 | Not Available | Positive | 127002 - 127298 | 11245.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
