Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | A5893_06010 | Not Available | Negative | 1515657 - 1517237 | 56838.5 |
| atpase | A5893_06015 | Not Available | Negative | 1517370 - 1517918 | 20046.8 |
| f0f1 atp synthase subunit b | A5893_06020 | Not Available | Negative | 1518018 - 1518512 | 18628.7 |
| f0f1 atp synthase subunit c | A5893_06025 | Not Available | Negative | 1518591 - 1518809 | 6770.56 |
| f0f1 atp synthase subunit a | A5893_06030 | Not Available | Negative | 1518853 - 1519968 | 42006.7 |
| hypothetical protein | A5893_06035 | Not Available | Negative | 1519983 - 1520372 | 15480.5 |
| hypothetical protein | A5893_06040 | Not Available | Negative | 1520369 - 1520590 | 8326.24 |
| hypothetical protein | A5893_06045 | Not Available | Negative | 1520550 - 1520978 | 14691.6 |
| peptidase m23 | A5893_06050 | Not Available | Negative | 1520989 - 1521855 | 32458.8 |
| hypothetical protein | A5893_06055 | Not Available | Positive | 1521960 - 1524875 | 110686.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
