Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_05960 | Not Available | Positive | 1506830 - 1507498 | 25083.9 |
| hypothetical protein | A5893_05965 | Not Available | Positive | 1507505 - 1508155 | 24893.3 |
| nad+ synthase | A5893_05970 | Not Available | Negative | 1508152 - 1509792 | 61127.6 |
| hypothetical protein | A5893_05975 | Not Available | Negative | 1509806 - 1510444 | 23045.5 |
| gliding motility lipoprotein gldb | A5893_05980 | Not Available | Positive | 1510478 - 1511521 | 40465.5 |
| patatin | A5893_05985 | Not Available | Positive | 1511524 - 1512309 | 29025.7 |
| hypothetical protein | A5893_05990 | Not Available | Negative | 1512339 - 1512524 | 6698.51 |
| hypothetical protein | A5893_05995 | Not Available | Positive | 1512659 - 1513123 | 17143.8 |
| atpase | A5893_06000 | Not Available | Negative | 1513360 - 1514454 | 41696.2 |
| f0f1 atp synthase subunit gamma | A5893_06005 | Not Available | Negative | 1514679 - 1515563 | 32438.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
