Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photolyase | A5893_05910 | Not Available | Negative | 1495271 - 1496809 | 61089.3 |
| deoxyribodipyrimidine photolyase | A5893_05915 | Not Available | Negative | 1496887 - 1498188 | 50774.3 |
| rna methyltransferase | A5893_05920 | Not Available | Positive | 1498610 - 1498897 | 11780.3 |
| 23s rrna pseudouridine synthase f | A5893_05925 | Not Available | Negative | 1498902 - 1499636 | 28083.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | A5893_05930 | Not Available | Negative | 1499640 - 1500188 | 20514.4 |
| hypothetical protein | A5893_05935 | Not Available | Negative | 1500198 - 1500497 | 11535.8 |
| hypothetical protein | A5893_05940 | Not Available | Negative | 1500525 - 1502330 | 69188.7 |
| hypothetical protein | A5893_05945 | Not Available | Positive | 1502521 - 1504416 | 72817.5 |
| two-component sensor histidine kinase | A5893_05950 | Not Available | Positive | 1504420 - 1506090 | 64222.9 |
| dna-binding response regulator | A5893_05955 | Not Available | Positive | 1506092 - 1506778 | 26447.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
