Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome segregation protein scpa | A5893_05860 | Not Available | Positive | 1480672 - 1481433 | 29757.2 |
| oxidoreductase | A5893_05865 | Not Available | Negative | 1481390 - 1482412 | 38540.6 |
| serine hydroxymethyltransferase | A5893_05870 | Not Available | Positive | 1482538 - 1483809 | 46228.8 |
| hypothetical protein | A5893_05875 | Not Available | Positive | 1483834 - 1486596 | 104330.0 |
| hypothetical protein | A5893_05880 | Not Available | Negative | 1486598 - 1487626 | 39704.2 |
| hypothetical protein | A5893_05885 | Not Available | Negative | 1487629 - 1489356 | 67703.0 |
| glycosyl transferase family 2 | A5893_05890 | Not Available | Negative | 1489356 - 1489760 | 15688.3 |
| dihydrolipoamide succinyltransferase | A5893_05895 | Not Available | Negative | 1489825 - 1491369 | 55425.2 |
| 2-oxoglutarate dehydrogenase e1 component | A5893_05900 | Not Available | Negative | 1491392 - 1494196 | 106767.0 |
| hypothetical protein | A5893_05905 | Not Available | Negative | 1494300 - 1495196 | 34535.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
